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  5. Als_g08115

Als_g08115 (CPN21, ATCPN21,...)


Aliases : CPN21, ATCPN21, CHCPN10, CPN10, CPN20

Description : Hsp60-co-chaperone *(Hsp20) & original description: none


Gene families : OG0002061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08115
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Dcu_g09096 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13054 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015036001 CPN21, ATCPN21,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Gb_14915 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.03 OrthoFinder output from all 47 species
LOC_Os06g09679.1 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.03 OrthoFinder output from all 47 species
LOC_Os09g26730.1 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 OrthoFinder output from all 47 species
Msp_g05140 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004459 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: CDS=1-741 0.04 OrthoFinder output from all 47 species
Sam_g19651 No alias Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Smo270691 CPN21, ATCPN21,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
Spa_g12433 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17719 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29973 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11622 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0140662 ATP-dependent protein folding chaperone IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 58 147
IPR020818 Chaperonin_GroES 156 249
No external refs found!