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  5. Als_g07552

Als_g07552


Description : not classified & original description: none


Gene families : OG0002523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07552
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT5G40160 EMB139, EMB506 Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene06535.t1 Aspi01Gene06535 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10009 EMB139, EMB506 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g13000.1 EMB139, EMB506,... Ankyrin repeat domain-containing protein EMB506,... 0.03 OrthoFinder output from all 47 species
Nbi_g38840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33242 EMB16, EMB2036, AKRP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g061820.4.1 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc09g009290.3.1 EMB139, EMB506,... Ankyrin repeat domain-containing protein EMB506,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 316 404
No external refs found!