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  5. Pnu_g10005

Pnu_g10005


Description : not classified & original description: none


Gene families : OG0008483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10005

Target Alias Description ECC score Gene Family Method Actions
Aev_g02320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58266.t1 Aspi01Gene58266 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008132 No alias not classified & original description: CDS=109-1671 0.03 OrthoFinder output from all 47 species
Ceric.39G049100.1 Ceric.39G049100 not classified & original description: pacid=50583129... 0.03 OrthoFinder output from all 47 species
Cre11.g467633 No alias CDK5RAP1-like protein OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g13412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035596 methylthiotransferase activity IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 233 407
IPR013848 Methylthiotransferase_N 88 186
No external refs found!