Pnu_g04408 (EMB2769)


Aliases : EMB2769

Description : component *(CWC15) of MAC spliceosome-associated complex & original description: none


Gene families : OG0004019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004019_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g04408

Target Alias Description ECC score Gene Family Method Actions
Aev_g45995 EMB2769 component *(CWC15) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Dcu_g04448 EMB2769 component *(CWC15) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Solyc07g065800.3.1 EMB2769, Solyc07g065800 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
CC GO:0005681 spliceosomal complex IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006973 Cwf_Cwc_15 1 232
No external refs found!