Pnu_g02424 (HEME2)

Aliases : HEME2

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0002087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002087_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g02424
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00219480	HEME2,...	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder output from all 47 species
AT2G40490	HEME2	Uroporphyrinogen decarboxylase	0.04	OrthoFinder output from all 47 species
AT3G14930	HEME1	Uroporphyrinogen decarboxylase	0.03	OrthoFinder output from all 47 species
Adi_g022638	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g060395	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g04033	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g13341	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Als_g03706	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g12256	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g07294	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.16G044600.1	HEME2, Ceric.16G044600	EC_4.1 carbon-carbon lyase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.27G010500.1	HEME1, Ceric.27G010500	EC_4.1 carbon-carbon lyase & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021319.48	HEME2	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder output from all 47 species
Cre02.g073700	HEME2	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder output from all 47 species
Cre02.g076300	HEME1	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder output from all 47 species
Cre11.g467700	HEME2	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder output from all 47 species
Dac_g08545	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g01104	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g01091	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02496	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01032710001	HEME2	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder output from all 47 species
Len_g09571	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g02865	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
MA_10435949g0010	HEME2	uroporphyrinogen III decarboxylase	0.03	OrthoFinder output from all 47 species
Mp1g00080.1	HEME2	uroporphyrinogen III decarboxylase	0.03	OrthoFinder output from all 47 species
Mp2g07210.1	HEME2	uroporphyrinogen III decarboxylase	0.03	OrthoFinder output from all 47 species
Nbi_g04176	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g13179	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16765	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g00935	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017290	HEME2	EC_4.1 carbon-carbon lyase & original description: CDS=109-1317	0.04	OrthoFinder output from all 47 species
Smo438672	HEME2	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder output from all 47 species
Solyc06g048730.3.1	HEME2, Solyc06g048730	uroporphyrinogen III decarboxylase	0.03	OrthoFinder output from all 47 species
Solyc10g007320.3.1	HEME1, Solyc10g007320	uroporphyrinogen III decarboxylase	0.04	OrthoFinder output from all 47 species
Spa_g06611	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g09313	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g00829	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000257	Uroporphyrinogen_deCOase	70	403

External Links

No external refs found!

Pnu_g02424 (HEME2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation