MA_3618g0010


Description : 10.7 cell wall.modification Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A1 (EXPA1)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_3618g0010
Cluster HCCA cluster: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.02 Gene family
GSVIVT01014362001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01028474001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os02g16780 Os02g0267700 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os02g16800 Os02g0267900 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os02g51040 Os02g0744200 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os06g50400 Os06g0718100 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_103404g0010 No alias 10.7 cell wall.modification expansin-like protein.... 0.02 Gene family
MA_474624g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo230202 PACid_15412224 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Solyc06g005560.3.1 Solyc06g005560.3 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Solyc09g010860.3.1 Solyc09g010860.3 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d016022 GRMZM2G146540 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d018031 GRMZM2G105844 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 58 103
No external refs found!