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  5. Cba_g68158

Cba_g68158


Description : not classified & original description: none


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g68158
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Gb_02938 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g30810.1 LOC_Os02g30810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10901g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_176455g0020 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g02744 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g36410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g14670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010130_P001 Zm00001e010130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 221 291
No external refs found!