Coexpression cluster: Cluster_122 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009058 biosynthetic process 9.94% (17/171) 1.57 6.9e-05 0.003245
GO:0044249 cellular biosynthetic process 9.36% (16/171) 1.65 5.9e-05 0.003465
GO:0009059 macromolecule biosynthetic process 8.19% (14/171) 1.83 4.9e-05 0.003819
GO:1901576 organic substance biosynthetic process 9.94% (17/171) 1.65 3.4e-05 0.003986
GO:0044271 cellular nitrogen compound biosynthetic process 8.77% (15/171) 1.84 2.4e-05 0.005506
GO:0034645 cellular macromolecule biosynthetic process 7.02% (12/171) 1.76 0.000257 0.008592
GO:0034641 cellular nitrogen compound metabolic process 8.77% (15/171) 1.43 0.000524 0.008765
GO:1901566 organonitrogen compound biosynthetic process 7.6% (13/171) 1.69 0.000227 0.008845
GO:0043604 amide biosynthetic process 6.43% (11/171) 1.75 0.000492 0.008859
GO:0044260 cellular macromolecule metabolic process 7.6% (13/171) 1.63 0.000347 0.009013
GO:0006518 peptide metabolic process 6.43% (11/171) 1.72 0.000579 0.00904
GO:0009987 cellular process 16.96% (29/171) 0.98 0.00031 0.009053
GO:0005198 structural molecule activity 6.43% (11/171) 1.71 0.00064 0.009358
GO:0003735 structural constituent of ribosome 6.43% (11/171) 1.76 0.000481 0.009377
GO:0043603 amide metabolic process 6.43% (11/171) 1.69 0.000701 0.00965
GO:0043043 peptide biosynthetic process 6.43% (11/171) 1.76 0.000476 0.010127
GO:0006412 translation 6.43% (11/171) 1.76 0.000464 0.010847
GO:1903825 organic acid transmembrane transport 1.17% (2/171) 5.22 0.001358 0.011351
GO:1905039 carboxylic acid transmembrane transport 1.17% (2/171) 5.22 0.001358 0.011351
GO:1990542 mitochondrial transmembrane transport 1.17% (2/171) 5.11 0.001563 0.011797
GO:0015711 organic anion transport 1.17% (2/171) 5.02 0.001781 0.011909
GO:0046942 carboxylic acid transport 1.17% (2/171) 5.02 0.001781 0.011909
GO:0015849 organic acid transport 1.17% (2/171) 4.99 0.001857 0.012071
GO:0043228 non-membrane-bounded organelle 5.85% (10/171) 1.64 0.001551 0.012098
GO:0043232 intracellular non-membrane-bounded organelle 5.85% (10/171) 1.64 0.001551 0.012098
GO:0008150 biological_process 20.47% (35/171) 0.75 0.001344 0.0121
GO:0110165 cellular anatomical entity 10.53% (18/171) 1.12 0.001678 0.012268
GO:0001163 RNA polymerase I transcription regulatory region sequence-specific DNA binding 0.58% (1/171) 9.57 0.001313 0.012287
GO:0001046 core promoter sequence-specific DNA binding 0.58% (1/171) 9.57 0.001313 0.012287
GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding 0.58% (1/171) 9.57 0.001313 0.012287
GO:0055085 transmembrane transport 4.68% (8/171) 1.87 0.001776 0.012595
GO:0043226 organelle 6.43% (11/171) 1.48 0.002224 0.013694
GO:1901475 pyruvate transmembrane transport 1.17% (2/171) 5.25 0.001293 0.013754
GO:0006850 mitochondrial pyruvate transmembrane transport 1.17% (2/171) 5.25 0.001293 0.013754
GO:0006848 pyruvate transport 1.17% (2/171) 5.25 0.001293 0.013754
GO:0015718 monocarboxylic acid transport 1.17% (2/171) 5.25 0.001293 0.013754
GO:0043229 intracellular organelle 6.43% (11/171) 1.48 0.002218 0.014028
GO:0005575 cellular_component 11.7% (20/171) 1.0 0.002528 0.015166
GO:0005840 ribosome 5.85% (10/171) 1.68 0.001288 0.016743
GO:1901362 organic cyclic compound biosynthetic process 2.92% (5/171) 2.35 0.003237 0.018475
GO:0071704 organic substance metabolic process 13.45% (23/171) 0.89 0.003168 0.018534
GO:0044238 primary metabolic process 12.87% (22/171) 0.91 0.003348 0.018655
GO:0000976 transcription cis-regulatory region binding 0.58% (1/171) 7.99 0.003933 0.020451
GO:1990837 sequence-specific double-stranded DNA binding 0.58% (1/171) 7.99 0.003933 0.020451
GO:0001067 transcription regulatory region nucleic acid binding 0.58% (1/171) 7.99 0.003933 0.020451
GO:0016832 aldehyde-lyase activity 1.17% (2/171) 4.38 0.004235 0.021542
GO:0019866 organelle inner membrane 1.17% (2/171) 4.29 0.004818 0.022549
GO:0005743 mitochondrial inner membrane 1.17% (2/171) 4.29 0.004818 0.022549
GO:0001181 RNA polymerase I general transcription initiation factor activity 0.58% (1/171) 7.57 0.00524 0.022709
GO:0006361 transcription initiation at RNA polymerase I promoter 0.58% (1/171) 7.57 0.00524 0.022709
GO:0140223 general transcription initiation factor activity 0.58% (1/171) 7.57 0.00524 0.022709
GO:0006810 transport 5.26% (9/171) 1.52 0.004577 0.022786
GO:0051234 establishment of localization 5.26% (9/171) 1.51 0.004801 0.023405
GO:0051179 localization 5.26% (9/171) 1.49 0.005194 0.02383
GO:0022857 transmembrane transporter activity 4.09% (7/171) 1.68 0.006719 0.028588
GO:0005215 transporter activity 4.09% (7/171) 1.65 0.007535 0.031483
GO:0034654 nucleobase-containing compound biosynthetic process 2.34% (4/171) 2.37 0.007951 0.03264
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 1.17% (2/171) 3.77 0.009687 0.039082
GO:0008152 metabolic process 13.45% (23/171) 0.75 0.010134 0.040191
GO:0044237 cellular metabolic process 10.53% (18/171) 0.85 0.011779 0.045939
GO:0043170 macromolecule metabolic process 9.36% (16/171) 0.9 0.012465 0.047817
GO:0019438 aromatic compound biosynthetic process 2.34% (4/171) 2.15 0.013207 0.049845
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_12 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_41 0.026 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_46 0.02 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_63 0.033 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_158 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_45 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_48 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_53 0.034 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_54 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_55 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_121 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_144 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_169 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_194 0.039 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_231 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_251 0.034 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_268 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_293 0.03 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_328 0.025 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_64 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_69 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_81 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_82 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_109 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_110 0.021 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_156 0.015 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_54 0.034 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_56 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_59 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_148 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_175 0.023 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_197 0.019 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_200 0.023 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_204 0.018 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_207 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_229 0.024 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_14 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_127 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_91 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_74 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_66 0.019 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_74 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_17 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_75 0.022 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_141 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_8 0.022 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_21 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_49 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_55 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_82 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_89 0.029 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_127 0.032 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_241 0.025 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_28 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_51 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_91 0.023 OrthoFinder output from all 47 species Compare
Sequences (171) (download table)

InterPro Domains

GO Terms

Family Terms