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Description : component *(eL8) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001502_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g46928 | |
| Cluster | HCCA: Cluster_441 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00218360 | evm_27.TU.AmTr_v1... | 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00047p00140090 | evm_27.TU.AmTr_v1... | 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00047p00140240 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
| AT2G47610 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G62870 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g02937 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00994 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g38500 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04061 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g10465 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene23106.t1 | Aspi01Gene23106 | component *(eL8) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0148.g053103 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g10534 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.08G064100.1 | Ceric.08G064100 | component *(eL8) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000128.22 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g529651 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g03427 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g30506 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g01249 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01036540001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_36761 | No alias | component RPL7a of LSU proteome component | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os09g32976.1 | LOC_Os09g32976 | component RPL7a of LSU proteome component | 0.01 | OrthoFinder output from all 47 species | |
| MA_109678g0010 | No alias | component RPL7a of LSU proteome component | 0.01 | OrthoFinder output from all 47 species | |
| MA_648702g0010 | No alias | component RPL7a of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g23250.1 | No alias | component RPL7a of LSU proteome component | 0.01 | OrthoFinder output from all 47 species | |
| Mp8g17650.1 | No alias | component RPL7a of LSU proteome component | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g01446 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g34164 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Ore_g17079 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g06600 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09914 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g28887 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo270545 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g10426 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g40004 | No alias | component *(eL8) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e034633_P002 | Zm00001e034633 | component RPL7a of LSU proteome component | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 122 | 209 |
| No external refs found! |