Cba_g45894 (RAN2)

Aliases : RAN2

Description : GTPase *(Ran) & original description: none

Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g45894
Cluster	HCCA: Cluster_441

Target	Alias	Description	ECC score	Gene Family Method
AT5G55190	RAN3, ATRAN3	RAN GTPase 3	0.01	OrthoFinder output from all 47 species
Adi_g001520	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g026180	RAN2	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g16328	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28653	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g38517	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.08	OrthoFinder output from all 47 species
Azfi_s0147.g053043	RAN2	GTPase *(Ran) & original description: CDS=1-873	0.01	OrthoFinder output from all 47 species
Azfi_s0548.g076431	RAN2	GTPase *(Ran) & original description: CDS=1-873	0.01	OrthoFinder output from all 47 species
Cba_g03752	RAN2	GTPase *(Ran) & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g06673	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g20605	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G019400.1	RAN3, ATRAN3,...	GTPase *(Ran) & original description: pacid=50612012...	0.02	OrthoFinder output from all 47 species
Ceric.35G063800.1	RAN3, ATRAN3,...	GTPase *(Ran) & original description: pacid=50581751...	0.02	OrthoFinder output from all 47 species
GSVIVT01015482001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
GSVIVT01035805001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.01	OrthoFinder output from all 47 species
LOC_Os05g49890.1	RAN3, ATRAN3,...	Ran GTPase	0.01	OrthoFinder output from all 47 species
Lfl_g23100	RAN2	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g32303	RAN2	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g16965	No alias	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g104680.4.1	RAN2, Solyc01g104680	Ran GTPase	0.02	OrthoFinder output from all 47 species
Spa_g24464	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008097	5S rRNA binding	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	3	159

External Links

No external refs found!

Cba_g45894 (RAN2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation