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  5. Cba_g43800

Cba_g43800 (HEXO2, ATHEX3)


Aliases : HEXO2, ATHEX3

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000932 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000932_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g43800

Target Alias Description ECC score Gene Family Method Actions
Ala_g31130 HEXO1, ATHEX2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01194 ATHEX1, HEXO3 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_205286g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g30208 HEXO2, ATHEX3 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38649 HEXO2, ATHEX3 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40735 HEXO2, ATHEX3 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR015883 Glyco_hydro_20_cat 151 416
IPR029019 HEX_eukaryotic_N 2 128
No external refs found!