Cba_g38597 (WRKY3)

Aliases : WRKY3

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g38597

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00208940	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00065p00201830	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G69310	ATWRKY57, WRKY57	WRKY DNA-binding protein 57	0.03	OrthoFinder output from all 47 species
AT2G25000	ATWRKY60, WRKY60	WRKY DNA-binding protein 60	0.02	OrthoFinder output from all 47 species
AT2G44745	No alias	WRKY family transcription factor	0.03	OrthoFinder output from all 47 species
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.03	OrthoFinder output from all 47 species
Adi_g046396	WRKY2, ATWRKY2	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g058124	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058352	WRKY3	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g07730	WRKY61, ATWRKY61	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14365	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18778	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g20940	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g30728	WRKY2, ATWRKY2	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g42426	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0117.g046593	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: CDS=1-1809	0.03	OrthoFinder output from all 47 species
Cba_g22410	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.29G026500.1	Ceric.29G026500	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g12166	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11137	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_26411	WRKY28, ATWRKY28	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Gb_36184	WRKY3	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Gb_40261	WRKY75, ATWRKY75	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g09080.1	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g09100.1	ATWRKY50,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g18584.1	AtWRKY47,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g47560.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g27730.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
LOC_Os07g39480.1	AtWRKY20,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os08g17400.1	WRKY4, LOC_Os08g17400	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os08g29660.1	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os12g32250.1	WRKY3, LOC_Os12g32250	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Len_g28971	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g05639	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_10426942g0010	ATWRKY24, WRKY24	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_120969g0010	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_3469g0010	WRKY2, ATWRKY2	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_892467g0010	WRKY72, ATWRKY72	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp1g24950.1	ATWRKY64, WRKY64	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Mp2g20960.1	WRKY62, ATWRKY62	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp8g10640.1	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g14181	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g19074	ATWRKY51, WRKY51	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g10273	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14502	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15530	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g33322	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g10405	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18765	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26717	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g34683	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g40045	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g40618	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g52309	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g058540.3.1	WRKY48,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc05g055750.3.1	MSP3, ATWRKY34,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc12g006170.2.1	AtWRKY20,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g16962	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g09572	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005219_P001	WRKY1, ZAP1,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e016622_P001	ATWRKY50,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Zm00001e018322_P001	WRKY4, Zm00001e018322	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027989_P001	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e029445_P001	WRKY3, Zm00001e029445	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e040369_P001	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004512	inositol-3-phosphate synthase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006020	inositol metabolic process	IEP	HCCA
BP	GO:0006021	inositol biosynthetic process	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	318	374
IPR003657	WRKY_dom	500	556

External Links

No external refs found!

Cba_g38597 (WRKY3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation