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  5. Cba_g37756

Cba_g37756 (TFC E, PFI)


Aliases : TFC E, PFI

Description : cofactor of post-CCT Tubulin folding pathway *(TFC-E) & original description: none


Gene families : OG0005685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005685_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g37756

Target Alias Description ECC score Gene Family Method Actions
AT1G71440 TFC E, PFI tubulin folding cofactor E / Pfifferling (PFI) 0.03 OrthoFinder output from all 47 species
Dac_g15060 TFC E, PFI cofactor of post-CCT Tubulin folding pathway *(TFC-E) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024464 TFC E, PFI cofactor of post-CCT Tubulin folding pathway *(TFC-E) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 159 173
IPR000938 CAP-Gly_domain 12 80
No external refs found!