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  5. Cba_g26776

Cba_g26776


Description : not classified & original description: none


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g26776

Target Alias Description ECC score Gene Family Method Actions
AT5G50530 No alias CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0.02 OrthoFinder output from all 47 species
AT5G50640 No alias CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0.02 OrthoFinder output from all 47 species
Ala_g08528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g072050.4.1 Solyc06g072050 CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g032950.3.1 Solyc12g032950 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 332 374
IPR000644 CBS_dom 164 208
IPR000644 CBS_dom 104 150
IPR000644 CBS_dom 272 319
IPR000270 PB1_dom 453 535
No external refs found!