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  5. Cba_g23972

Cba_g23972 (DEGP1, Deg1)


Aliases : DEGP1, Deg1

Description : protease *(Deg) & original description: none


Gene families : OG0000904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000904_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23972
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00259680 DEGP8, DEG8,... Protein degradation.peptidase families.serine-type... 0.06 OrthoFinder output from all 47 species
AMTR_s00058p00188880 DEGP1, Deg1,... Protein degradation.peptidase families.serine-type... 0.07 OrthoFinder output from all 47 species
AT3G27925 DEGP1, Deg1 DegP protease 1 0.06 OrthoFinder output from all 47 species
AT5G39830 DEGP8, DEG8 Trypsin family protein with PDZ domain 0.03 OrthoFinder output from all 47 species
Adi_g022654 DEGP1, Deg1 protease *(Deg) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g08196 DEGP1, Deg1 protease *(Deg) & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g20921 DEGP1, Deg1 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene43506.t1 DEGP1, Deg1,... protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G006800.1 DEGP1, Deg1,... protease *(Deg) & original description: pacid=50577199... 0.02 OrthoFinder output from all 47 species
Ceric.23G008400.1 DEGP1, Deg1,... protease *(Deg) & original description: pacid=50610154... 0.03 OrthoFinder output from all 47 species
Cre01.g028350 DEGP8, DEG8 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Dac_g16130 DEGP8, DEG8 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10119 DEGP1, Deg1 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13473 DEGP1, Deg1 protease *(Deg) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g10547 DEGP8, DEG8 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30398 DEGP1, Deg1 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01065 DEGP8, DEG8 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011396001 DEGP8, DEG8 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01034494001 DEGP1, Deg1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Gb_21206 DEGP8, DEG8 protease (Deg) 0.04 OrthoFinder output from all 47 species
Gb_28169 DEGP1, Deg1 protease (Deg) 0.04 OrthoFinder output from all 47 species
Gb_28170 DEGP1, Deg1 protease (Deg) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49380.1 DEGP1, Deg1,... protease (Deg) 0.04 OrthoFinder output from all 47 species
Len_g01244 DEGP1, Deg1 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02003 DEGP1, Deg1 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04654 DEGP8, DEG8 protease *(Deg) & original description: none 0.07 OrthoFinder output from all 47 species
MA_10426639g0010 DEGP1, Deg1 protease (Deg) 0.03 OrthoFinder output from all 47 species
MA_950571g0010 DEGP8, DEG8 Protease Do-like 8, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g08351 DEGP8, DEG8 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07690 DEGP1, Deg1 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09443 DEGP1, Deg1 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09508 DEGP8, DEG8 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04085 DEGP8, DEG8 protease *(Deg) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g43951 DEGP1, Deg1 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06205 DEGP1, Deg1 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15398 DEGP8, DEG8 protease *(Deg) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16356 DEGP1, Deg1 protease *(Deg) & original description: none 0.06 OrthoFinder output from all 47 species
Smo176144 DEGP1, Deg1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Solyc02g067360.3.1 DEGP8, DEG8,... protease (Deg) 0.03 OrthoFinder output from all 47 species
Solyc02g086830.3.1 DEGP1, Deg1,... protease (Deg) 0.03 OrthoFinder output from all 47 species
Spa_g05629 DEGP1, Deg1 protease *(Deg) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e026566_P003 DEGP1, Deg1,... protease (Deg) 0.06 OrthoFinder output from all 47 species
Zm00001e032469_P001 DEGP1, Deg1,... protease (Deg) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001478 PDZ 399 496
No external refs found!