1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g23414

Cba_g23414 (ATRLI2, RLI2)


Aliases : ATRLI2, RLI2

Description : ribosome recycling factor *(RLI/ABCE) & original description: none


Gene families : OG0003870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003870_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23414
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT4G19210 ATRLI2, RLI2 RNAse l inhibitor protein 2 0.04 OrthoFinder output from all 47 species
Aev_g01310 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Als_g06334 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Aob_g03318 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Cba_g14661 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.04 OrthoFinder output from all 47 species
Ceric.05G080200.1 ATRLI2, RLI2,... ribosome recycling factor *(RLI/ABCE) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021517.10 ATRLI2, RLI2 Protein biosynthesis.translation termination.ribosome... 0.01 OrthoFinder output from all 47 species
Cre09.g409350 ATRLI2, RLI2 Protein biosynthesis.translation termination.ribosome... 0.02 OrthoFinder output from all 47 species
Dac_g00919 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g02938 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g09918 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Mp8g05210.1 ATRLI2, RLI2 ribosome recycling factor (RLI/ABCE) 0.01 OrthoFinder output from all 47 species
Nbi_g02970 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Pir_g00566 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g008340.4.1 ATRLI2, RLI2,... ribosome recycling factor (RLI/ABCE) 0.04 OrthoFinder output from all 47 species
Tin_g04640 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 157 179
IPR007209 RNaseL-inhib-like_metal-bd_dom 114 145
IPR003439 ABC_transporter-like_ATP-bd 210 352
IPR003439 ABC_transporter-like_ATP-bd 479 604
No external refs found!