Cba_g22337 (LOS1)

Aliases : LOS1

Description : mRNA-translocation factor *(eEF2)) & original description: none

Gene families : OG0001393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001393_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g22337

Target	Alias	Description	ECC score	Gene Family Method
Als_g14719	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.25G007600.1	LOS1, Ceric.25G007600	mRNA-translocation factor *(eEF2)) & original...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021464.39	LOS1	Protein biosynthesis.translation elongation.eEF2...	0.02	OrthoFinder output from all 47 species
Dde_g19221	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01020404001	LOS1	Elongation factor 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
LOC_Os02g32030.1	LOS1, LOC_Os02g32030	mRNA-translocation factor (eEF2)	0.02	OrthoFinder output from all 47 species
Lfl_g12274	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23642	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g20190.1	LOS1	mRNA-translocation factor (eEF2)	0.02	OrthoFinder output from all 47 species
Mp2g20200.1	LOS1	mRNA-translocation factor (eEF2)	0.02	OrthoFinder output from all 47 species
Pir_g09744	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c7_1950V3.1	LOS1, Pp3c7_1950	Ribosomal protein S5/Elongation factor G/III/V family protein	0.01	OrthoFinder output from all 47 species
Sam_g38282	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g49446	No alias	mRNA-translocation factor *(eEF2)) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc08g062910.4.1	LOS1, Solyc08g062910	mRNA-translocation factor (eEF2)	0.02	OrthoFinder output from all 47 species
Solyc08g062920.3.1	LOS1, Solyc08g062920	mRNA-translocation factor (eEF2)	0.04	OrthoFinder output from all 47 species
Zm00001e006293_P001	LOS1, Zm00001e006293	mRNA-translocation factor (eEF2)	0.02	OrthoFinder output from all 47 species
Zm00001e006294_P001	LOS1, Zm00001e006294	mRNA-translocation factor (eEF2)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006835	dicarboxylic acid transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015740	C4-dicarboxylate transport	IEP	HCCA
BP	GO:0015743	malate transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000640	EFG_V-like	724	809
IPR005517	Transl_elong_EFG/EF2_IV	611	722
IPR004161	EFTu-like_2	394	467
IPR000795	T_Tr_GTP-bd_dom	17	342
IPR041095	EFG_II	487	549

External Links

No external refs found!

Cba_g22337 (LOS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation