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  5. Cba_g15062

Cba_g15062


Description : not classified & original description: none


Gene families : OG0002956 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002956_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15062
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00123520 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G57040 No alias Lactoylglutathione lyase / glyoxalase I family protein 0.03 OrthoFinder output from all 47 species
Aev_g25396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08141 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015161001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_04851 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g06660.1 LOC_Os07g06660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g30341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04243 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019246 No alias not classified & original description: CDS=110-724 0.03 OrthoFinder output from all 47 species
Solyc07g040950.3.1 Solyc07g040950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g09190 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g04875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 87 202
No external refs found!