1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g10884

Cba_g10884


Description : not classified & original description: none


Gene families : OG0005387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005387_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g10884

Target Alias Description ECC score Gene Family Method Actions
Aob_g07222 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36504.t1 Aspi01Gene36504 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G037200.1 Ceric.31G037200 not classified & original description: pacid=50575016... 0.05 OrthoFinder output from all 47 species
Dde_g07515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01121 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14026 CTF2A not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g26899 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61824 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41030 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo447003 No alias Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Spa_g51315 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 170 375
No external refs found!