Description : component *(uL18c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0005910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005910_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cba_g10879 | |
Cluster | HCCA: Cluster_288 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00013p00209880 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
AT1G48350 | No alias | Ribosomal L18p/L5e family protein | 0.05 | OrthoFinder output from all 47 species | |
Aop_g20657 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.13G022200.1 | Ceric.13G022200 | component *(uL18c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Cre01.g052100 | No alias | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g31625 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Dde_g24129 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02012 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01017720001 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
Gb_12756 | No alias | component psRPL18 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g61260.1 | LOC_Os03g61260 | component psRPL18 of large ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
Len_g30980 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Mp6g08500.1 | No alias | component psRPL18 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
Msp_g22178 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g07265 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g00223 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g02809 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0079.g017759 | No alias | EC_3.2 glycosylase & original description: CDS=437-952 | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g098890.2.1 | Solyc12g098890 | component psRPL18 of large ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species | |
Spa_g00581 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e006246_P001 | Zm00001e006246 | component psRPL18 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005484 | Ribosomal_L18 | 61 | 178 |
No external refs found! |