Aliases : RGP3, RGP
Description : UDP-L-arabinose mutase & original description: none
Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cba_g09139 | |
Cluster | HCCA: Cluster_7 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Dde_g26962 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
MF | GO:0043531 | ADP binding | IEP | HCCA |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR037595 | RGP_fam | 4 | 337 |
No external refs found! |