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  5. Cba_g08197

Cba_g08197


Description : ribonuclease *(RNC1) & original description: none


Gene families : OG0004387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08197
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT4G37510 No alias Ribonuclease III family protein 0.07 OrthoFinder output from all 47 species
Adi_g051860 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36445 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12300 No alias ribonuclease *(RNC1) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g03344 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000334 No alias ribonuclease *(RNC1) & original description: CDS=41-2044 0.04 OrthoFinder output from all 47 species
Ceric.37G005400.1 Ceric.37G005400 ribonuclease *(RNC1) & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g14710 No alias ribonuclease *(RNC1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30224 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000148001 No alias RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
Len_g38817 No alias ribonuclease *(RNC1) & original description: none 0.01 OrthoFinder output from all 47 species
Mp1g04540.1 No alias ribonuclease (RNC1) 0.03 OrthoFinder output from all 47 species
Nbi_g17999 No alias ribonuclease *(RNC1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18587 No alias ribonuclease *(RNC1) & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g13594 No alias ribonuclease *(RNC1) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005842 No alias ribonuclease *(RNC1) & original description: CDS=1-1689 0.03 OrthoFinder output from all 47 species
Smo145591 No alias RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
Solyc10g080040.3.1 Solyc10g080040 ribonuclease (RNC1) 0.03 OrthoFinder output from all 47 species
Zm00001e019511_P001 Zm00001e019511 ribonuclease (RNC1) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!