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  5. Cba_g07610

Cba_g07610 (CID12, ATRBP37, RBP37)


Aliases : CID12, ATRBP37, RBP37

Description : not classified & original description: none


Gene families : OG0000804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000804_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07610

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00219700 CID9,... Polyadenylate-binding protein-interacting protein 11... 0.02 OrthoFinder output from all 47 species
Adi_g088809 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117217 CID11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19462 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11106 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40102 CID12, ATRBP37, RBP37 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19559 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26585.t1 CID11, Aspi01Gene26585 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012066 CID12, ATRBP37, RBP37 not classified & original description: CDS=1-1341 0.03 OrthoFinder output from all 47 species
Cba_g50091 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06522 CID12, ATRBP37, RBP37 Polyadenylate-binding protein-interacting protein 12... 0.03 OrthoFinder output from all 47 species
MA_116722g0010 CID11 Polyadenylate-binding protein-interacting protein 12... 0.02 OrthoFinder output from all 47 species
Mp4g11450.3 CID12, ATRBP37, RBP37 Polyadenylate-binding protein-interacting protein 11... 0.02 OrthoFinder output from all 47 species
Nbi_g21845 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17641 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02187 CID12, ATRBP37, RBP37 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12178 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008973 CID12, ATRBP37, RBP37 not classified & original description: CDS=173-1417 0.04 OrthoFinder output from all 47 species
Smo66365 CID12, ATRBP37, RBP37 Polyadenylate-binding protein-interacting protein 11... 0.02 OrthoFinder output from all 47 species
Solyc10g007590.4.1 CID9, Solyc10g007590 Polyadenylate-binding protein-interacting protein 9... 0.02 OrthoFinder output from all 47 species
Spa_g05210 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21523 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016496_P002 CID9, Zm00001e016496 Polyadenylate-binding protein-interacting protein 9... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 250 312
IPR000504 RRM_dom 347 413
No external refs found!