Aliases : ATPRP40A, PRP40A
Description : pre-mRNA-processing protein *(PRP40A/B) & original description: none
Gene families : OG0002189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002189_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00010p00227470 | ATPRP40A,... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
AT1G44910 | ATPRP40A, PRP40A | pre-mRNA-processing protein 40A | 0.02 | OrthoFinder output from all 47 species | |
AT3G19670 | ATPRP40B, PRP40B | pre-mRNA-processing protein 40B | 0.02 | OrthoFinder output from all 47 species | |
Adi_g109853 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g02608 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g08024 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g23383 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g02355 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g14297 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g27081 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0486.g073429 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.06G057100.1 | ATPRP40A,... | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.36G014500.1 | ATPRP40A,... | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cre07.g351000 | ATPRP40A, PRP40A | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g14060 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02927 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009302001 | ATPRP40A, PRP40A | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g34780.1 | ATPRP40A,... | pre-mRNA-processing protein (PRP40A/B) | 0.02 | OrthoFinder output from all 47 species | |
Len_g12959 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g08148 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.04 | OrthoFinder output from all 47 species | |
MA_10433850g0010 | ATPRP40A, PRP40A | pre-mRNA-processing protein (PRP40A/B) | 0.03 | OrthoFinder output from all 47 species | |
Ore_g17451 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g15971 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g55467 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0033.g011005 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g13746 | No alias | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g09384 | ATPRP40A, PRP40A | pre-mRNA-processing protein *(PRP40A/B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e020778_P001 | ATPRP40A,... | pre-mRNA-processing protein (PRP40A/B) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016160 | amylase activity | IEP | HCCA |
MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No external refs found! |