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  5. Cba_g02073

Cba_g02073 (ATRPA70A, RPA1A,...)


Aliases : ATRPA70A, RPA1A, ATRPA1A, RPA70A

Description : component *(RPA1) of RPA presynaptic filament assembly factor complex & original description: none


Gene families : OG0002229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002229_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02073

Target Alias Description ECC score Gene Family Method Actions
AT2G06510 ATRPA70A, RPA1A,... replication protein A 1A 0.02 OrthoFinder output from all 47 species
Dac_g08725 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Lfl_g03267 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Msp_g19364 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Pnu_g14040 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007199 Rep_factor-A_N 55 151
IPR004365 NA-bd_OB_tRNA 289 371
IPR031657 REPA_OB_2 399 503
IPR013955 Rep_factor-A_C 560 709
IPR001878 Znf_CCHC 844 859
No external refs found!