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  5. Cba_g01898

Cba_g01898 (PCB2)


Aliases : PCB2

Description : divinyl chlorophyllide-a 8-vinyl-reductase & original description: none


Gene families : OG0006248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01898
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00165960 PCB2,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.05 OrthoFinder output from all 47 species
AT5G18660 PCB2 NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g082286 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.06 OrthoFinder output from all 47 species
Aev_g04677 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.03 OrthoFinder output from all 47 species
Aop_g12815 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0056.g034071 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14224 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.03 OrthoFinder output from all 47 species
Dde_g30171 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.04 OrthoFinder output from all 47 species
Ehy_g13304 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01017797001 PCB2 Divinyl chlorophyllide a 8-vinyl-reductase,... 0.02 OrthoFinder output from all 47 species
Len_g15930 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06613 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.04 OrthoFinder output from all 47 species
MA_129451g0010 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase 0.04 OrthoFinder output from all 47 species
Mp5g20690.1 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase 0.05 OrthoFinder output from all 47 species
Nbi_g04177 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.05 OrthoFinder output from all 47 species
Pir_g19290 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.06 OrthoFinder output from all 47 species
Ppi_g12397 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017878 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.04 OrthoFinder output from all 47 species
Sam_g07146 No alias divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.02 OrthoFinder output from all 47 species
Solyc01g067290.3.1 PCB2, Solyc01g067290 divinyl chlorophyllide-a 8-vinyl-reductase 0.04 OrthoFinder output from all 47 species
Spa_g07463 PCB2 divinyl chlorophyllide-a 8-vinyl-reductase & original... 0.02 OrthoFinder output from all 47 species
Zm00001e001662_P001 PCB2, Zm00001e001662 divinyl chlorophyllide-a 8-vinyl-reductase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 94 306
No external refs found!