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  5. Cba_g01687

Cba_g01687 (FIB)


Aliases : FIB

Description : Fibrillin plastoglobule core protein *(FBN1/2) & original description: none


Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01687
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00085290 evm_27.TU.AmTr_v1... Plastid lipid-associated protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT2G35490 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.02 OrthoFinder output from all 47 species
Aev_g10976 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.12 OrthoFinder output from all 47 species
Als_g02332 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.12 OrthoFinder output from all 47 species
Aob_g19138 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000159 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Ceric.12G091200.1 FIB, Ceric.12G091200 Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Dac_g17027 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Dde_g12841 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Ehy_g08272 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Ehy_g24089 No alias Fibrillin plastoglobule core protein *(FBN8) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01013072001 No alias Probable plastid-lipid-associated protein 3,... 0.02 OrthoFinder output from all 47 species
LOC_Os09g04790.1 LOC_Os09g04790 Probable plastid-lipid-associated protein 2,... 0.02 OrthoFinder output from all 47 species
LOC_Os10g42500.1 LOC_Os10g42500 Probable plastid-lipid-associated protein 3,... 0.06 OrthoFinder output from all 47 species
Lfl_g01291 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.05 OrthoFinder output from all 47 species
MA_153977g0010 No alias Plastid-lipid-associated protein, chloroplastic... 0.07 OrthoFinder output from all 47 species
MA_28715g0010 No alias Light-induced protein, chloroplastic OS=Solanum... 0.06 OrthoFinder output from all 47 species
Ore_g45290 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.07 OrthoFinder output from all 47 species
Pir_g18705 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Ppi_g09162 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.11 OrthoFinder output from all 47 species
Sam_g29401 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.05 OrthoFinder output from all 47 species
Smo163532 No alias Plastid lipid-associated protein 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g08959 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.06 OrthoFinder output from all 47 species
Spa_g25316 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.07 OrthoFinder output from all 47 species
Tin_g21553 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.09 OrthoFinder output from all 47 species
Zm00001e002454_P001 Zm00001e002454 Probable plastid-lipid-associated protein 3,... 0.07 OrthoFinder output from all 47 species
Zm00001e007939_P001 Zm00001e007939 Probable plastid-lipid-associated protein 2,... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 102 317
No external refs found!