Description : mTERF-type transcription factor & original description: none
Gene families : OG0007794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007794_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g51944 | |
Cluster | HCCA: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g05068 | EMB2219 | mTERF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g15023 | EMB2219 | mTERF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g17251 | EMB2219 | mTERF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01031970001 | EMB2219 | RNA biosynthesis.organelle... | 0.02 | OrthoFinder output from all 47 species | |
Gb_07758 | EMB2219 | transcription factor (mTERF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g04230.1 | EMB2219, LOC_Os07g04230 | transcription factor (mTERF) | 0.03 | OrthoFinder output from all 47 species | |
Ore_g29514 | No alias | mTERF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g13328 | EMB2219 | mTERF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g109630.4.1 | EMB2219, Solyc01g109630 | transcription factor (mTERF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032771_P001 | EMB2219, Zm00001e032771 | transcription factor (mTERF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No external refs found! |