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  5. Sam_g51360

Sam_g51360


Description : not classified & original description: none


Gene families : OG0003454 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51360

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00210460 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g59181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G052200.1 Ceric.29G052200 not classified & original description: pacid=50625312... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001265.7 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre09.g409200 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g20817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035595001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g51960.1 LOC_Os04g51960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g074440.4.1 Solyc08g074440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g52511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!