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  5. Sam_g49579

Sam_g49579


Description : not classified & original description: none


Gene families : OG0013307 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013307_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49579

Target Alias Description ECC score Gene Family Method Actions
Sam_g48418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49484 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g49580 No alias classical arabinogalactan protein & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002557 Chitin-bd_dom 26 83
IPR002557 Chitin-bd_dom 233 289
IPR002557 Chitin-bd_dom 133 189
No external refs found!