Sam_g39488


Description : not classified & original description: none


Gene families : OG0009033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009033_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39488
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Aop_g34017 No alias not classified & original description: none 0.26 OrthoFinder output from all 47 species
Aop_g47099 No alias not classified & original description: none 0.21 OrthoFinder output from all 47 species
Aop_g66249 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Dcu_g51214 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g29713 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g22152 No alias not classified & original description: none 0.22 OrthoFinder output from all 47 species
Sam_g27250 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Sam_g34593 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Sam_g38523 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Sam_g39487 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Sam_g40725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48292 No alias not classified & original description: none 0.21 OrthoFinder output from all 47 species
Sam_g52959 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001254 Trypsin_dom 34 269
No external refs found!