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  5. Sam_g38622

Sam_g38622


Description : not classified & original description: none


Gene families : OG0006194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38622
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Aop_g52873 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Pir_g47152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23581 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Sam_g26419 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Sam_g36728 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Sam_g36729 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Sam_g38621 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Sam_g41767 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g42401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45377 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002018 CarbesteraseB 1 292
No external refs found!