Description : cargo receptor protein *(PUX7/8/9/13) & original description: none
Gene families : OG0002894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002894_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00069p00109170 | SAY1,... | Plant UBX domain-containing protein 8 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
Adi_g057748 | SAY1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g107306 | SAY1 | cargo receptor protein *(PUX7/8/9/13) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g06080 | SAY1 | cargo receptor protein *(PUX7/8/9/13) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g01165 | SAY1 | cargo receptor protein *(PUX7/8/9/13) & original... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0075.g037627 | SAY1 | cargo receptor protein *(PUX7/8/9/13) & original... | 0.02 | OrthoFinder output from all 47 species | |
Gb_05634 | SAY1 | adaptor protein (PUX7/8/9/13) | 0.03 | OrthoFinder output from all 47 species | |
Len_g14275 | SAY1 | cargo receptor protein *(PUX7/8/9/13) & original... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g20270.1 | SAY1 | adaptor protein (PUX7/8/9/13) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g07140 | SAY1 | cargo receptor protein *(PUX7/8/9/13) & original... | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0123.g021516 | SAY1 | cargo receptor protein *(PUX7/8/9/13) & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g13519 | SAY1 | cargo receptor protein *(PUX7/8/9/13) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e034750_P003 | SAY1, Zm00001e034750 | adaptor protein (PUX7/8/9/13) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
MF | GO:2001070 | starch binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001012 | UBX_dom | 543 | 621 |
No external refs found! |