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  5. Sam_g36271

Sam_g36271


Description : not classified & original description: none


Gene families : OG0007190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36271

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0022.g016061 No alias not classified & original description: CDS=142-1473 0.03 OrthoFinder output from all 47 species
Cba_g30644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G052800.1 Ceric.07G052800 not classified & original description: pacid=50627413... 0.04 OrthoFinder output from all 47 species
GSVIVT01001994001 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_02355 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g28050.3 LOC_Os06g28050 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g08849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo403442 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g30583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!