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  5. Sam_g35721

Sam_g35721


Description : not classified & original description: none


Gene families : OG0001920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35721

Target Alias Description ECC score Gene Family Method Actions
AT5G04550 No alias Protein of unknown function (DUF668) 0.02 OrthoFinder output from all 47 species
Ala_g12873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_55500g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g15197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g007660.1.1 Solyc11g007660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045927 positive regulation of growth IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007700 DUF668 424 515
IPR021864 DUF3475 45 101
No external refs found!