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  5. Sam_g33712

Sam_g33712


Description : not classified & original description: none


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g33712

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00058010 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G10750 No alias Protein of Unknown Function (DUF239) 0.02 OrthoFinder output from all 47 species
Aev_g07149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G081500.1 Ceric.04G081500 not classified & original description: pacid=50630860... 0.03 OrthoFinder output from all 47 species
Ceric.19G057700.1 Ceric.19G057700 not classified & original description: pacid=50575152... 0.02 OrthoFinder output from all 47 species
Ceric.21G046500.1 Ceric.21G046500 not classified & original description: pacid=50603415... 0.05 OrthoFinder output from all 47 species
Ehy_g06829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007693001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_08416 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g36660.1 LOC_Os01g36660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07764.2 LOC_Os05g07764 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g28000.1 LOC_Os06g28000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g10530.1 LOC_Os07g10530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g38590.1 LOC_Os07g38590 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g13971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10359231g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019026 No alias not classified & original description: CDS=1200-1997 0.02 OrthoFinder output from all 47 species
Smo90379 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g081570.3.1 Solyc01g081570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g070080.1.1 Solyc11g070080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g38129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016772_P001 Zm00001e016772 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037003_P001 Zm00001e037003 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP
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 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 46 135
No external refs found!