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  5. Sam_g30741

Sam_g30741


Description : profilin actin nucleation protein & original description: none


Gene families : OG0000183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30741
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Als_g56743 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31389 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g45358 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16971 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25725 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47175 No alias profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR005455 PFN 4 131
No external refs found!