1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g29942

Sam_g29942


Description : EC_5.5 intramolecular lyase & original description: none


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29942
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G016800.1 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description:... 0.04 OrthoFinder output from all 47 species
Mp7g00020.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Ore_g20199 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 172 378
No external refs found!