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  5. Sam_g28384

Sam_g28384


Description : pyrophosphohydrolase *(NUDX) & original description: none


Gene families : OG0001074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001074_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28384

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00183180 NUDT8, atnudt8,... Nudix hydrolase 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G47240 NUDT8, atnudt8 nudix hydrolase homolog 8 0.02 OrthoFinder output from all 47 species
Ala_g25956 NUDT8, atnudt8 pyrophosphohydrolase *(NUDX) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G052700.1 ATNUDX2,... pyrophosphohydrolase *(NUDX) & original description:... 0.02 OrthoFinder output from all 47 species
Gb_03707 NUDT8, atnudt8 Nudix hydrolase 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_03708 ATNUDX2, ATNUDT2, NUDT2 Nudix hydrolase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g08127 ATNUDX2, ATNUDT2, NUDT2 pyrophosphohydrolase *(NUDX) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000086 NUDIX_hydrolase_dom 123 246
IPR040618 Pre-Nudix 30 109
No external refs found!