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  5. Sam_g27205

Sam_g27205


Description : protease *(Deg) & original description: none


Gene families : OG0000904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27205

Target Alias Description ECC score Gene Family Method Actions
AT5G39830 DEGP8, DEG8 Trypsin family protein with PDZ domain 0.03 OrthoFinder output from all 47 species
Cre01.g028350 DEGP8, DEG8 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Gb_10820 DEGP1, Deg1 protease (Deg) 0.02 OrthoFinder output from all 47 species
Gb_24576 DEGP1, Deg1 protease (Deg) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49380.1 DEGP1, Deg1,... protease (Deg) 0.02 OrthoFinder output from all 47 species
MA_8577889g0010 DEGP1, Deg1 protease (Deg) 0.01 OrthoFinder output from all 47 species
Mp7g10590.1 DEGP1, Deg1 protease (Deg) 0.03 OrthoFinder output from all 47 species
Msp_g07620 DEGP1, Deg1 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27216 DEGP1, Deg1 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09443 DEGP1, Deg1 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14261 DEGP1, Deg1 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44906 DEGP1, Deg1 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!