Sam_g22478

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g22478
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.03	OrthoFinder output from all 47 species
AT2G03340	WRKY3	WRKY DNA-binding protein 3	0.02	OrthoFinder output from all 47 species
AT2G21900	ATWRKY59, WRKY59	WRKY DNA-binding protein 59	0.02	OrthoFinder output from all 47 species
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.03	OrthoFinder output from all 47 species
AT4G26640	AtWRKY20, WRKY20	WRKY family transcription factor family protein	0.04	OrthoFinder output from all 47 species
Aev_g32350	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g33360	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g11196	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g08377	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g16136	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene30007.t1	ATWRKY45,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene65374.t1	ATWRKY24,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene65375.t1	ATWRKY24,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0052.g031586	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: CDS=1-864	0.03	OrthoFinder output from all 47 species
Cba_g02867	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G048500.1	Ceric.13G048500	not classified & original description: pacid=50636587...	0.03	OrthoFinder output from all 47 species
Ceric.1Z119500.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.20G087100.1	Ceric.20G087100	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.25G052100.1	WRKY42,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.31G073200.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G073300.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Dcu_g14822	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g31448	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g27429	WRKY72, ATWRKY72	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01020864001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
GSVIVT01029688001	WRKY9, ATWRKY9	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01034148001	WRKY49, ATWRKY49	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
LOC_Os02g43560.1	LOC_Os02g43560	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os04g46060.1	LOC_Os04g46060	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os09g30400.3	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
LOC_Os11g02480.2	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g48398	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10428091g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_120697g0010	ATWRKY71, WRKY71	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_120969g0010	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_212937g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_2290g0010	ATWRKY30, WRKY30	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_310991g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_381058g0010	WRKY18, ATWRKY18	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
MA_49848g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_6177g0010	AtWRKY41, WRKY41	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Ore_g19872	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29204	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g16309	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g02742	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g42318	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g42620	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020447	WRKY72, ATWRKY72	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022367	ATWRKY58, WRKY58	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g28984	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g34683	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g38149	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g40618	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g058540.3.1	WRKY48,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc02g094270.2.1	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc04g056365.1.1	Solyc04g056365	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc07g056280.3.1	ATWRKY71,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc08g081630.2.1	WRKY56,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc12g011200.3.1	WRKY28,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g37539	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31472	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e007834_P002	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e016669_P001	ATWRKY13,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e018502_P001	WRKY49,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e024352_P003	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	HCCA
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0140299	small molecule sensor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	387	427

External Links

No external refs found!

Sam_g22478

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation