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  5. Sam_g22366

Sam_g22366


Description : not classified & original description: none


Gene families : OG0000047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g22366
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Aop_g36547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12960.t1 Aspi01Gene12960 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20863.t1 Aspi01Gene20863 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29236.t1 Aspi01Gene29236 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40800.t1 Aspi01Gene40800 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57611.t1 Aspi01Gene57611 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012769 No alias not classified & original description: CDS=1-759 0.04 OrthoFinder output from all 47 species
Cba_g24634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g20561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g37758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c24_1068V3.1 Pp3c24_1068 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g62097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013965 No alias not classified & original description: CDS=25-1119 0.02 OrthoFinder output from all 47 species
Spa_g15167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021287_P001 Zm00001e021287 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!