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  5. Lfl_g27546

Lfl_g27546


Description : not classified & original description: none


Gene families : OG0004442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g27546
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252270 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
Aob_g12547 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
LOC_Os03g60790.1 LOC_Os03g60790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g06510.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ore_g28276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006263 No alias not classified & original description: CDS=1-678 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026077 No alias not classified & original description: CDS=70-900 0.05 OrthoFinder output from all 47 species
Solyc09g015360.4.1 Solyc09g015360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 75 135
No external refs found!