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  5. Sam_g19478

Sam_g19478


Description : ABC1 atypical protein kinase & original description: none


Gene families : OG0002354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19478
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00243670 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.atypical kinase... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00237980 ATATH13, OSA1,... Protein modification.phosphorylation.atypical kinase... 0.03 OrthoFinder output from all 47 species
AT3G07700 No alias Protein kinase superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G64940 ATATH13, OSA1,... ABC2 homolog 13 0.05 OrthoFinder output from all 47 species
Adi_g081477 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03406 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22404 No alias ABC1 atypical protein kinase & original description: none 0.08 OrthoFinder output from all 47 species
Als_g06373 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02223 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04775 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10284 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene70662.t1 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023543 No alias ABC1 atypical protein kinase & original description: CDS=340-2502 0.04 OrthoFinder output from all 47 species
Azfi_s0102.g044540 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: CDS=409-2883 0.02 OrthoFinder output from all 47 species
Cba_g06547 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07643 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G001700.1 ATATH13, OSA1,... ABC1 atypical protein kinase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.29G083900.1 ATATH13, OSA1,... ABC1 atypical protein kinase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.31G066400.1 Ceric.31G066400 not classified & original description: pacid=50574282... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.54 No alias Protein modification.phosphorylation.atypical kinase... 0.02 OrthoFinder output from all 47 species
Cre08.g369150 No alias Protein modification.phosphorylation.atypical kinase... 0.04 OrthoFinder output from all 47 species
Cre13.g570350 ATATH13, OSA1,... Protein modification.phosphorylation.atypical kinase... 0.02 OrthoFinder output from all 47 species
Dac_g12269 No alias ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03078 No alias ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29446 No alias ABC1 atypical protein kinase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09241 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09985 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022210001 ATATH13, OSA1,... Protein modification.phosphorylation.atypical kinase... 0.05 OrthoFinder output from all 47 species
Gb_35512 ATATH13, OSA1,... protein kinase (ABC1) 0.04 OrthoFinder output from all 47 species
LOC_Os02g36570.1 ATATH13, OSA1,... protein kinase (ABC1) 0.04 OrthoFinder output from all 47 species
LOC_Os09g07660.2 LOC_Os09g07660 protein kinase (ABC1) 0.03 OrthoFinder output from all 47 species
Len_g10500 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17341 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.05 OrthoFinder output from all 47 species
MA_10429129g0010 No alias Protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_219331g0010 ATATH13, OSA1,... Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g14864 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24096 No alias ABC1 atypical protein kinase & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g19058 No alias ABC1 atypical protein kinase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05740 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g19960 No alias ABC1 atypical protein kinase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04306 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g19689 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13453 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g14566 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18570 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Smo78366 ATATH13, OSA1,... Protein modification.phosphorylation.atypical kinase... 0.05 OrthoFinder output from all 47 species
Solyc04g054190.3.1 ATATH13, OSA1,... protein kinase (ABC1) 0.03 OrthoFinder output from all 47 species
Solyc07g045420.4.1 Solyc07g045420 protein kinase (ABC1) 0.02 OrthoFinder output from all 47 species
Spa_g18898 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e013010_P001 Zm00001e013010 protein kinase (ABC1) 0.09 OrthoFinder output from all 47 species
Zm00001e014904_P001 ATATH13, OSA1,... protein kinase (ABC1) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004147 ABC1_dom 321 569
No external refs found!