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  5. Sam_g17824

Sam_g17824


Description : not classified & original description: none


Gene families : OG0003005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17824
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241300 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00046p00146170 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G52510 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G12830 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g12791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0590.g078724 No alias not classified & original description: CDS=122-673 0.05 OrthoFinder output from all 47 species
Cba_g32208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.10G064900.1 Ceric.10G064900 not classified & original description: pacid=50613395... 0.04 OrthoFinder output from all 47 species
Dac_g05957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017376001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g55180.1 LOC_Os04g55180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g02240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g04750.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g16820.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g047900.2.1 Solyc09g047900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g11921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06884 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e041772_P001 Zm00001e041772 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 129 236
No external refs found!