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  5. Sam_g16195

Sam_g16195


Description : subfamily ABCG transporter & original description: none


Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16195

Target Alias Description ECC score Gene Family Method Actions
AT2G37010 ATNAP12, NAP12 non-intrinsic ABC protein 12 0.03 OrthoFinder output from all 47 species
AT5G60740 No alias ABC transporter family protein 0.02 OrthoFinder output from all 47 species
Als_g62849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72406.t2 Aspi01Gene72406 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72409.t1 Aspi01Gene72409 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037686 No alias subfamily ABCG transporter & original description: CDS=355-3330 0.03 OrthoFinder output from all 47 species
Azfi_s0380.g067358 No alias subfamily ABCG transporter & original description: CDS=43-3537 0.02 OrthoFinder output from all 47 species
Zm00001e037060_P003 Zm00001e037060 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 723 1131
IPR003439 ABC_transporter-like_ATP-bd 543 694
No external refs found!