Sam_g15158

Description : subunit b_ of membrane CF0 subcomplex of ATP synthase complex & original description: none

Gene families : OG0005814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005814_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g15158
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00046p00093500	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.ATP synthase...	0.07	OrthoFinder output from all 47 species
AT4G32260	No alias	ATPase, F0 complex, subunit B/B', bacterial/chloroplast	0.12	OrthoFinder output from all 47 species
Adi_g020901	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.05	OrthoFinder output from all 47 species
Aev_g00401	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
Ala_g03875	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
Als_g03457	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.1	OrthoFinder output from all 47 species
Als_g31303	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.04	OrthoFinder output from all 47 species
Aob_g06415	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.05	OrthoFinder output from all 47 species
Aop_g06049	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.12	OrthoFinder output from all 47 species
Aspi01Gene48990.t1	Aspi01Gene48990	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.05	OrthoFinder output from all 47 species
Azfi_s0305.g063940	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.08	OrthoFinder output from all 47 species
Azfi_s1503.g103747	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.08	OrthoFinder output from all 47 species
Cba_g18499	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.05	OrthoFinder output from all 47 species
Ceric.17G082700.1	Ceric.17G082700	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.11	OrthoFinder output from all 47 species
Ceric.1Z100400.1	Ceric.1Z100400	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.1	OrthoFinder output from all 47 species
Cre11.g481450	No alias	Photosynthesis.photophosphorylation.ATP synthase...	0.05	OrthoFinder output from all 47 species
Dac_g03611	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.12	OrthoFinder output from all 47 species
Dcu_g06034	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.06	OrthoFinder output from all 47 species
Dde_g23849	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.1	OrthoFinder output from all 47 species
Ehy_g02248	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.03	OrthoFinder output from all 47 species
Gb_16254	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase complex	0.09	OrthoFinder output from all 47 species
LOC_Os03g17070.1	LOC_Os03g17070	subunit b_ of membrane CF0 subcomplex of ATP synthase complex	0.08	OrthoFinder output from all 47 species
Len_g21232	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.13	OrthoFinder output from all 47 species
Lfl_g26912	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.06	OrthoFinder output from all 47 species
MA_128169g0010	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase complex	0.08	OrthoFinder output from all 47 species
Mp1g25120.1	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase complex	0.13	OrthoFinder output from all 47 species
Msp_g04971	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
Msp_g37980	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.11	OrthoFinder output from all 47 species
Nbi_g39087	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.08	OrthoFinder output from all 47 species
Ore_g00782	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.03	OrthoFinder output from all 47 species
Ore_g26495	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.05	OrthoFinder output from all 47 species
Pir_g12409	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.05	OrthoFinder output from all 47 species
Pnu_g12114	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.03	OrthoFinder output from all 47 species
Pp3c16_15270V3.1	Pp3c16_15270	ATPase, F0 complex, subunit B/B\, bacterial/chloroplast	0.03	OrthoFinder output from all 47 species
Ppi_g52171	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026456	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.03	OrthoFinder output from all 47 species
Smo16497	No alias	Photosynthesis.photophosphorylation.ATP synthase...	0.03	OrthoFinder output from all 47 species
Solyc06g065990.1.1	Solyc06g065990	subunit b_ of membrane CF0 subcomplex of ATP synthase complex	0.09	OrthoFinder output from all 47 species
Solyc06g066000.3.1	Solyc06g066000	subunit b_ of membrane CF0 subcomplex of ATP synthase complex	0.11	OrthoFinder output from all 47 species
Spa_g09784	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
Spa_g29718	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
Tin_g07247	No alias	subunit b_ of membrane CF0 subcomplex of ATP synthase...	0.1	OrthoFinder output from all 47 species
Zm00001e038467_P001	Zm00001e038467	subunit b_ of membrane CF0 subcomplex of ATP synthase complex	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEA	Interproscan
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002146	ATP_synth_b/b'su_bac/chlpt	112	242

External Links

No external refs found!

Sam_g15158

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation