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  5. Sam_g14911

Sam_g14911


Description : not classified & original description: none


Gene families : OG0001760 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001760_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14911

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269010 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g012779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30617 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene04693.t1 Aspi01Gene04693 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19389 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12500 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g06044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_51370g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5303g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g01638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!