Sam_g14431


Description : not classified & original description: none


Gene families : OG0004217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004217_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14431
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT4G38225 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g019542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09890.t1 Aspi01Gene09890 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0535.g076092 No alias not classified & original description: CDS=1-1002 0.03 OrthoFinder output from all 47 species
Cba_g23776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G081100.1 Ceric.17G081100 not classified & original description: pacid=50617968... 0.03 OrthoFinder output from all 47 species
Dac_g11246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_15857 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g03670.1 LOC_Os03g03670 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g09577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g23476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo81134 No alias No description available 0.04 OrthoFinder output from all 47 species
Tin_g29084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!