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  5. Sam_g13598

Sam_g13598


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13598

Target Alias Description ECC score Gene Family Method Actions
AT5G63840 RSW3, PSL5 Glycosyl hydrolases family 31 protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene67769.t1 HGL1, Aspi01Gene67769 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043462 HGL1 EC_3.2 glycosylase & original description: CDS=288-3182 0.03 OrthoFinder output from all 47 species
Azfi_s0243.g059860 HGL1 EC_3.2 glycosylase & original description: CDS=1-2844 0.03 OrthoFinder output from all 47 species
Ceric.1Z103700.1 HGL1, Ceric.1Z103700 not classified & original description: pacid=50569390... 0.03 OrthoFinder output from all 47 species
Ceric.29G065300.1 RSW3, PSL5,... EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001066.5 RSW3, PSL5 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.01 OrthoFinder output from all 47 species
Dcu_g11064 RSW3, PSL5 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15248 RSW3, PSL5 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020935001 RSW3, PSL5 Protein modification.N-linked glycosylation.complex... 0.03 OrthoFinder output from all 47 species
LOC_Os03g11720.1 RSW3, PSL5,... subunit alpha of class-II glucosidase II complex 0.02 OrthoFinder output from all 47 species
Lfl_g18742 HGL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g06680.1 RSW3, PSL5 subunit alpha of class-II glucosidase II complex 0.02 OrthoFinder output from all 47 species
Pir_g09754 RSW3, PSL5 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000856_P001 RSW3, PSL5,... subunit alpha of class-II glucosidase II complex 0.03 OrthoFinder output from all 47 species
Zm00001e038713_P001 RSW3, PSL5,... subunit alpha of class-II glucosidase II complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025887 Glyco_hydro_31_N_dom 145 210
IPR033403 DUF5110 681 719
IPR000322 Glyco_hydro_31 235 663
No external refs found!